y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g045490.1 |
Family | GH17 |
Protein Properties | Length: 338 Molecular Weight: 35687.3 Isoelectric Point: 9.7146 |
Chromosome | Chromosome/Scaffold: 3 Start: 72740278 End: 72741667 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 336 | 0 |
IGVCYGMLGNNLPSSSDVVQLYKSKGIKGMRIYSPSQSALNALRNSGLAVIVDTGNGNELSQLARSASYAASWVQSNVKPYYPAVNIKYIAVGNEVQGGA TQSILPAIRNLDAALARAGLSAIKCSTSVRFDVIANSYPPSSGSFAQGYMADVARYLAGTGAPLLVNVYPYFSYRDNPRDISLGYATFQPGTTVRDNGNG LTYTNLFDAMVDAVVAALEKAGAGGVRIVVSESGWPSAGGSGASVDNARKYNQGLINHVGRGTPKRRGTLETFIFAMFNENQKTGDPTEKNFGLFYGNKQ PVYPISF |
Full Sequence |
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Protein Sequence Length: 338 Download |
MARQQQVASM LAAALLVATF ASIPTSVHSI GVCYGMLGNN LPSSSDVVQL YKSKGIKGMR 60 IYSPSQSALN ALRNSGLAVI VDTGNGNELS QLARSASYAA SWVQSNVKPY YPAVNIKYIA 120 VGNEVQGGAT QSILPAIRNL DAALARAGLS AIKCSTSVRF DVIANSYPPS SGSFAQGYMA 180 DVARYLAGTG APLLVNVYPY FSYRDNPRDI SLGYATFQPG TTVRDNGNGL TYTNLFDAMV 240 DAVVAALEKA GAGGVRIVVS ESGWPSAGGS GASVDNARKY NQGLINHVGR GTPKRRGTLE 300 TFIFAMFNEN QKTGDPTEKN FGLFYGNKQP VYPISFN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-145 | 30 | 336 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL35900.1 | 0 | 1 | 336 | 1 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
GenBank | EAY77183.1 | 0 | 1 | 336 | 1 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
RefSeq | NP_001045372.1 | 0 | 1 | 336 | 1 | 334 | Os01g0944700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140332.1 | 0 | 1 | 337 | 1 | 340 | hypothetical protein LOC100272379 [Zea mays] |
RefSeq | XP_002459077.1 | 0 | 1 | 337 | 1 | 337 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 30 | 336 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 30 | 336 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 30 | 336 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 30 | 336 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 30 | 336 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |