y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G079600.1 |
Family | GH17 |
Protein Properties | Length: 362 Molecular Weight: 39600.2 Isoelectric Point: 9.5131 |
Chromosome | Chromosome/Scaffold: 06 Start: 30544119 End: 30546956 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 338 | 0 |
IGVCYGMLGNNLPNAREVINLYKSNNIKRMRLYDPNQQALQALRGSNIEVILGVPNDQLQNLANPSKAQSWVRSNVVAYWPSVRFRYIAVGNEVPPSSSL ARFVLPALVNVFNAVRSAGLESRIKVSIAIDMTLIGVSYPPSAGAFRGDVRSYLDPIIGHLAWARTPLLANIYTYFSYSGNPRDISLPYALFTSPSPIVW DQGRGYQNLFDAMLDSLYSALEKAGQGGLEVVVSESGWPSAGGFGTSVDNAATYLSNLIKHVQKGTPKRPGKAIETYLFALFDENQKSGPELERHFGLFS PNKQPKYQLHF |
Full Sequence |
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Protein Sequence Length: 362 Download |
MAIFSSSMAA MLILGLLTAN LDPTVAQIGV CYGMLGNNLP NAREVINLYK SNNIKRMRLY 60 DPNQQALQAL RGSNIEVILG VPNDQLQNLA NPSKAQSWVR SNVVAYWPSV RFRYIAVGNE 120 VPPSSSLARF VLPALVNVFN AVRSAGLESR IKVSIAIDMT LIGVSYPPSA GAFRGDVRSY 180 LDPIIGHLAW ARTPLLANIY TYFSYSGNPR DISLPYALFT SPSPIVWDQG RGYQNLFDAM 240 LDSLYSALEK AGQGGLEVVV SESGWPSAGG FGTSVDNAAT YLSNLIKHVQ KGTPKRPGKA 300 IETYLFALFD ENQKSGPELE RHFGLFSPNK QPKYQLHFGG GRHWDIASKE YNATFPLKSD 360 M* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-6 | 57 | 330 | 287 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-166 | 28 | 338 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 6 | 361 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABG49448.1 | 0 | 6 | 361 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABK96486.1 | 0 | 1 | 361 | 1 | 372 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ACZ74626.1 | 0 | 6 | 361 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
RefSeq | XP_002314934.1 | 0 | 11 | 361 | 2 | 356 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 338 | 1 | 315 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure |
PDB | 3f55_C | 0 | 27 | 338 | 1 | 315 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure |
PDB | 3f55_B | 0 | 27 | 338 | 1 | 315 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure |
PDB | 3f55_A | 0 | 27 | 338 | 1 | 315 | A Chain A, Glucoamylase, Granular Starch-Binding Domain Complex With Cyclodextrin, Nmr, Minimized Average Structure |
PDB | 3em5_D | 0 | 27 | 338 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |