y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g083500.1 |
Family | CBM43 |
Protein Properties | Length: 513 Molecular Weight: 55357 Isoelectric Point: 8.4389 |
Chromosome | Chromosome/Scaffold: 4 Start: 28522189 End: 28525121 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 383 | 465 | 1.6e-33 |
WCVPKTNASEKALQANIDYVCSHGIDCGPIKNGGPCYKPDSLRSHAAYAMNAYYQKSGHHDSDCDFGHTGVITHTDPSSETCK | |||
GH17 | 25 | 340 | 0 |
IGVNYGTIANNLPPPTTVATFLKTQTTITHIKIFDTNSSILRAFANTNISVTVTVSNADIPSLTKLPSAQKWITTNILPFHPKTIFNRIAVGNEILATSD KTLIAHILPAMNALHQALTLSNLTHIQIVSPNSLGILSSSSPPSSAAFRRGYDVTIFTPILKFHRETKSPFMINPYPFFGISSNQPDALNYALFKPNGGV FDKATGINYTNMFDAQMDAVYSAMKKVGYGDVDLVVGETGWPSLGDPGQPGVSLENAVSYNGNLIKHVNSGKGTPLMPNRTFETYIFSLFNENLKPTISE QNYGLFKPDLTPVYDV |
Full Sequence |
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Protein Sequence Length: 513 Download |
MAVPFHFLLL LLLSTSNFSS ATYNIGVNYG TIANNLPPPT TVATFLKTQT TITHIKIFDT 60 NSSILRAFAN TNISVTVTVS NADIPSLTKL PSAQKWITTN ILPFHPKTIF NRIAVGNEIL 120 ATSDKTLIAH ILPAMNALHQ ALTLSNLTHI QIVSPNSLGI LSSSSPPSSA AFRRGYDVTI 180 FTPILKFHRE TKSPFMINPY PFFGISSNQP DALNYALFKP NGGVFDKATG INYTNMFDAQ 240 MDAVYSAMKK VGYGDVDLVV GETGWPSLGD PGQPGVSLEN AVSYNGNLIK HVNSGKGTPL 300 MPNRTFETYI FSLFNENLKP TISEQNYGLF KPDLTPVYDV GVLTQKHQQA MGPASGPTAM 360 GPASGPTAMG PSESPESSPS KKWCVPKTNA SEKALQANID YVCSHGIDCG PIKNGGPCYK 420 PDSLRSHAAY AMNAYYQKSG HHDSDCDFGH TGVITHTDPS SETCKFPYAA TSSGPNVKKP 480 DTDGGSLKSA TSKLRLYHFL FHLQFLIILC FL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-23 | 382 | 453 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-41 | 382 | 466 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-83 | 25 | 340 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 18 | 466 | 21 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 19 | 460 | 21 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312097.1 | 0 | 9 | 466 | 13 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312098.1 | 0 | 20 | 466 | 25 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 19 | 488 | 19 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 25 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 25 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 25 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 25 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |