y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000676131 |
Family | CBM43 |
Protein Properties | Length: 471 Molecular Weight: 50987.4 Isoelectric Point: 9.212 |
Chromosome | Chromosome/Scaffold: 006393325 Start: 12354 End: 14274 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 386 | 467 | 1.8e-31 |
WCVAKPGATDQALQSNIDYICGTGVDCKSVQPGGACFDNNVRARASYLMNTYYQANGLHDFNCDFSGSGQITTTDPSRGSCK | |||
GH17 | 23 | 329 | 0 |
IGVNYGTLADNLPPPAQVANFLKTQTNIDAVKIFDANPDIIKAFANSNISLTITVPNGEIPSLTKLRTARRWIIDHVKPFYPASKIKYIGMGNEVLHWGD DALKSSLVPAMKTLNNALVLEGIKDVKVSTPHSLGIMLASEPPSMGRFRPEVIPILTQMLRFCSQTKSPFMVNPYPYFGWSPEKENYALFGPNEGVHDKF TGKFYTNMFDGLMDALPRQIGFSDVNLIAAETGWPSACEFPVCSVQNAVDYNRNLIKHVESGKGTPLMPNRKFETYIFALFNENQKPGPAAEKNWGLFKP DMTPVYN |
Full Sequence |
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Protein Sequence Length: 471 Download |
MATTKLLLSL LLLVQLAATA YSIGVNYGTL ADNLPPPAQV ANFLKTQTNI DAVKIFDANP 60 DIIKAFANSN ISLTITVPNG EIPSLTKLRT ARRWIIDHVK PFYPASKIKY IGMGNEVLHW 120 GDDALKSSLV PAMKTLNNAL VLEGIKDVKV STPHSLGIML ASEPPSMGRF RPEVIPILTQ 180 MLRFCSQTKS PFMVNPYPYF GWSPEKENYA LFGPNEGVHD KFTGKFYTNM FDGLMDALPR 240 QIGFSDVNLI AAETGWPSAC EFPVCSVQNA VDYNRNLIKH VESGKGTPLM PNRKFETYIF 300 ALFNENQKPG PAAEKNWGLF KPDMTPVYNA GVMRNQQGGA TPGPTMKIPT QPSTPAAPKS 360 GKQGKPAKPA KPATPAAGGN NSGKKWCVAK PGATDQALQS NIDYICGTGV DCKSVQPGGA 420 CFDNNVRARA SYLMNTYYQA NGLHDFNCDF SGSGQITTTD PSRGSCKYNA * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 99 | 323 | 231 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-23 | 385 | 454 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 385 | 468 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-89 | 23 | 329 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 0 | 7 | 469 | 13 | 448 | unknown [Populus trichocarpa] |
GenBank | ACM45718.1 | 0 | 21 | 470 | 21 | 454 | endo-1,3-beta-glucanase [Pyrus pyrifolia] |
DDBJ | BAB40807.1 | 0 | 1 | 371 | 1 | 380 | endo-1,3-beta-glucanase-like protein [Pyrus pyrifolia] |
RefSeq | XP_002283647.1 | 0 | 16 | 468 | 21 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002312097.1 | 0 | 7 | 469 | 13 | 448 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 329 | 2 | 312 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_C | 0 | 23 | 329 | 2 | 312 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_B | 0 | 23 | 329 | 2 | 312 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3f55_A | 0 | 23 | 329 | 2 | 312 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3em5_D | 0 | 23 | 329 | 2 | 312 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |