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Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000321387 |
Family | CBM43 |
Protein Properties | Length: 512 Molecular Weight: 55391 Isoelectric Point: 4.8764 |
Chromosome | Chromosome/Scaffold: 000151272 Start: 5555 End: 7369 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 394 | 472 | 3.3e-29 |
WCVAKPHSDDKVLQAVLDFCCGAGGVDCREIYEHGDCFEPDKLLAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPR | |||
GH17 | 29 | 360 | 0 |
VGINYGTLGSNLPPPKRVAQLLQATLIDKVKIYDTNPEILQAFSNTGIDLIVAVENSHVPNISTEVAAADQWFATRVLPFIPATSITAIAVGNEYLTTGA AAGNDEKDPNPSDPXALVQAMQNLHSVLIARGLDRKIKVTTPHSMAVLASSFPPSASTFTTNLVPTMTSIAAFLADTNAPFMVNAYPYFAYRDNPDMVNL QYALLGNSTSTSVRDPKGYVYTNMLDAQIDAVRSAIDAXGLGHRKVEIMVSESGWPSKGDSGDMAATPDNAKTYNTRLIERAQSNKGTPMKPNDKVEIFV FALFNENKKEGGATERNFGIFNGDGSKVYNVD |
Full Sequence |
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Protein Sequence Length: 512 Download |
MATSLSLFLL LLLHPLIFSP FPNAVVSAVG INYGTLGSNL PPPKRVAQLL QATLIDKVKI 60 YDTNPEILQA FSNTGIDLIV AVENSHVPNI STEVAAADQW FATRVLPFIP ATSITAIAVG 120 NEYLTTGAAA GNDEKDPNPS DPXALVQAMQ NLHSVLIARG LDRKIKVTTP HSMAVLASSF 180 PPSASTFTTN LVPTMTSIAA FLADTNAPFM VNAYPYFAYR DNPDMVNLQY ALLGNSTSTS 240 VRDPKGYVYT NMLDAQIDAV RSAIDAXGLG HRKVEIMVSE SGWPSKGDSG DMAATPDNAK 300 TYNTRLIERA QSNKGTPMKP NDKVEIFVFA LFNENKKEGG ATERNFGIFN GDGSKVYNVD 360 LSCQFCSNTD GSGSGGGSGF GEKVAGVLRG PSVWCVAKPH SDDKVLQAVL DFCCGAGGVD 420 CREIYEHGDC FEPDKLLAHA SYAMNAYYQM HGRNYWNCDF KGTGLVTFSD PRFKTYVVFY 480 VDDEDIAFVM SPIPIPIPSQ CKTEEKEXGF EI 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-6 | 96 | 352 | 260 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-19 | 394 | 464 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-31 | 394 | 471 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-87 | 29 | 360 | 332 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40742.1 | 0 | 26 | 473 | 46 | 477 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001761806.1 | 0 | 20 | 486 | 25 | 469 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002272900.1 | 0 | 21 | 473 | 18 | 452 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300634.1 | 0 | 19 | 361 | 12 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510704.1 | 0 | 26 | 473 | 20 | 450 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 29 | 361 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 361 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 29 | 361 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 361 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 361 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |