y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000179206 |
Family | CBM43 |
Protein Properties | Length: 483 Molecular Weight: 52274.1 Isoelectric Point: 6.7446 |
Chromosome | Chromosome/Scaffold: 007017588 Start: 6738 End: 10428 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 339 | 417 | 6.3e-28 |
WCVPKSDVFIAQLQANLDYACGHGIDCSAIQPGGACFDPNTVASHAAYAMNLYYHIVVTVPLNCNFSQTATLTSSNPNK | |||
GH17 | 203 | 304 | 1.1e-34 |
KVDVVRSALNAVGFKDIDILIAETGWPYHGDDNEIGPSVENARAYNGNLIAHLRSMVGTPLMPGQSVETYIFALYDEDLKPGPASERYFGLFKPDLTATY DV | |||
GH17 | 29 | 173 | 2.90069e-42 |
IGVNYQVANNLSPPSNTAKLLQSTSIKRVHLYSVDPAIIKALAGSCITIVIDAANGDIPALTSDPNATGQWVNSNVLPFYPASKIDLINVGNEVLLSNDQ GLISQLLLAMRNVQSALTAASLDGKVRVSTVHSMAVLVQSDPPSV |
Full Sequence |
---|
Protein Sequence Length: 483 Download |
MASSLSHFPI LLLSILFTIF RSADSQSFIG VNYQVANNLS PPSNTAKLLQ STSIKRVHLY 60 SVDPAIIKAL AGSCITIVID AANGDIPALT SDPNATGQWV NSNVLPFYPA SKIDLINVGN 120 EVLLSNDQGL ISQLLLAMRN VQSALTAASL DGKVRVSTVH SMAVLVQSDP PSVDPRDSTH 180 SNLLQLDDVI RPNSFINFSR YHKVDVVRSA LNAVGFKDID ILIAETGWPY HGDDNEIGPS 240 VENARAYNGN LIAHLRSMVG TPLMPGQSVE TYIFALYDED LKPGPASERY FGLFKPDLTA 300 TYDVGLTKSS QMTHLKTFQR NTPSTPTVSP SPKPTSAQWC VPKSDVFIAQ LQANLDYACG 360 HGIDCSAIQP GGACFDPNTV ASHAAYAMNL YYHIVVTVPL NCNFSQTATL TSSNPNKFSL 420 TRAHIEMAQV YHDEDAHYTK GYPGGSTGLP VEAGKVNIIS NNGFVRVRNQ LDIRNKAFNC 480 KGS 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-10 | 102 | 297 | 206 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-19 | 338 | 409 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-33 | 338 | 415 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-63 | 29 | 304 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 8 | 416 | 3 | 445 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 8 | 447 | 3 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 21 | 415 | 51 | 480 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 21 | 415 | 51 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 20 | 416 | 19 | 449 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 6.00036e-42 | 29 | 306 | 3 | 314 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ur8_A | 6.00036e-42 | 29 | 306 | 3 | 314 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ur7_B | 6.00036e-42 | 29 | 306 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 6.00036e-42 | 29 | 306 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 5.99994e-41 | 29 | 306 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |