y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000146863 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 48406.6 Isoelectric Point: 4.9682 |
Chromosome | Chromosome/Scaffold: 002873106 Start: 42564 End: 46352 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 453 | 1.7e-32 |
WCVPKSGVSDAQLQANLDYACGHGIDCSAIQPGGACFDPNTVASHAAYAMNLYYHTVGTVPLNCDFSQTAMLTSSNPSYNACS | |||
GH17 | 29 | 346 | 0 |
IGVNYGQVADNLPPPSETAKLLQSTAIKRVRLYGADPAIIKALAGSGIAIAIGASNGDIPALASDPNAAAQWVNSNVLPFYPASKIDLINVGNEVLLSND QGLISQLLPAMRNVLSALSAASLGGKVRVSTVHSMAVLAQSDPPSSGQFNPGFQDVLKGLLAFQRDNGSPFAVNPYPFFAYQSDPRPETLAFCLFQPNAG RVDSGSGIKYMNMFDAQVDAVRSALNAVGFKDIDILITETGWPYHGDSNEVGTSVENARAYNGNLIAHLRSMVGTPLMPGKSVETYIFALYDEDLKPGPA SERSFGLFKPDLTATYEV |
Full Sequence |
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Protein Sequence Length: 459 Download |
MASSLSHFPI LLLFLSFTAF LSADSQSFIG VNYGQVADNL PPPSETAKLL QSTAIKRVRL 60 YGADPAIIKA LAGSGIAIAI GASNGDIPAL ASDPNAAAQW VNSNVLPFYP ASKIDLINVG 120 NEVLLSNDQG LISQLLPAMR NVLSALSAAS LGGKVRVSTV HSMAVLAQSD PPSSGQFNPG 180 FQDVLKGLLA FQRDNGSPFA VNPYPFFAYQ SDPRPETLAF CLFQPNAGRV DSGSGIKYMN 240 MFDAQVDAVR SALNAVGFKD IDILITETGW PYHGDSNEVG TSVENARAYN GNLIAHLRSM 300 VGTPLMPGKS VETYIFALYD EDLKPGPASE RSFGLFKPDL TATYEVGLTK SSQTPSTPTV 360 SPSPKPTSAQ WCVPKSGVSD AQLQANLDYA CGHGIDCSAI QPGGACFDPN TVASHAAYAM 420 NLYYHTVGTV PLNCDFSQTA MLTSSNPSYN ACSYTGGST 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 103 | 339 | 241 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-21 | 370 | 441 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-40 | 370 | 454 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-88 | 29 | 346 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 8 | 458 | 3 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 8 | 459 | 3 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 24 | 456 | 54 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 24 | 456 | 54 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 20 | 459 | 19 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 29 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 29 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 29 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |