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Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_67006g0010 |
Family | CBM43 |
Protein Properties | Length: 505 Molecular Weight: 53719.4 Isoelectric Point: 7.4067 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 395 | 473 | 1.6e-32 |
WCITKPGADEKTLEANLNYACGQGIDCRPIQPGGPCYSPNTVACHAAYAMNAYYQAAGRNSWNCDFGQTGTLTSTDPSM | |||
GH17 | 30 | 344 | 0 |
LGVDYGKTADNLPPPSAVAKMVQNTTISKLRLYDADPAILQAFANTGIGLVVGIGNDQIPSLSQLTVAQNWIKNNIVPFVPATDIIGILVGNEVLFTGDG ALISQLLPALQNLHTALVAVSLDQQIKVSTPHSMAILSASVPPSAGRFSESFDMKSLLDFLQKIGAPLMINPYPYFAYKSNPTDQTLAYSLFKPNPGFYD TNTGLTYTNMFDAQLDAVYSAMKYLGYTGIDIVVAETGWPSVGDPTEVGASLQNAIAYNGNLIKHVTSMAGTPLRPNRYIHTYIFALFNEDLKSGPTSER NYGLFKADMTMAYDV |
Full Sequence |
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Protein Sequence Length: 505 Download |
MILLPVILYC IPCGESGGRG RSLVQRSPAL GVDYGKTADN LPPPSAVAKM VQNTTISKLR 60 LYDADPAILQ AFANTGIGLV VGIGNDQIPS LSQLTVAQNW IKNNIVPFVP ATDIIGILVG 120 NEVLFTGDGA LISQLLPALQ NLHTALVAVS LDQQIKVSTP HSMAILSASV PPSAGRFSES 180 FDMKSLLDFL QKIGAPLMIN PYPYFAYKSN PTDQTLAYSL FKPNPGFYDT NTGLTYTNMF 240 DAQLDAVYSA MKYLGYTGID IVVAETGWPS VGDPTEVGAS LQNAIAYNGN LIKHVTSMAG 300 TPLRPNRYIH TYIFALFNED LKSGPTSERN YGLFKADMTM AYDVGLLQSP SAGPSPAPRT 360 GGPVTATPPR AGGSVTAPPT RTGGPVTAPP TGKVWCITKP GADEKTLEAN LNYACGQGID 420 CRPIQPGGPC YSPNTVACHA AYAMNAYYQA AGRNSWNCDF GQTGTLTSTD PSMHVKSSFL 480 RPLLLCLKTP LDLTTQTTSS LHRTL 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK05641 | PRK05641 | 0.002 | 343 | 394 | 52 | + putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated | ||
COG5309 | COG5309 | 3.0e-7 | 57 | 337 | 291 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-15 | 395 | 465 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-30 | 395 | 473 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-97 | 30 | 344 | 318 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24319.1 | 0 | 1 | 472 | 11 | 482 | unknown [Picea sitchensis] |
GenBank | ABK24695.1 | 0 | 29 | 475 | 26 | 479 | unknown [Picea sitchensis] |
GenBank | ABK25242.1 | 0 | 2 | 472 | 12 | 482 | unknown [Picea sitchensis] |
RefSeq | XP_002282736.1 | 0 | 23 | 472 | 20 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526252.1 | 0 | 30 | 473 | 31 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 30 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 30 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 30 | 346 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 30 | 346 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 30 | 346 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES876496 | 270 | 1 | 270 | 0 |
ES878179 | 270 | 1 | 270 | 0 |
ES875599 | 269 | 2 | 270 | 0 |
DR514833 | 267 | 4 | 270 | 0 |
DR533200 | 263 | 1 | 263 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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