y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_11716g0010 |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 51231.6 Isoelectric Point: 6.6605 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 394 | 475 | 4.5e-33 |
WCVAKPDADPKVLQANIDYACGQGVDCSPIQSGGSCFTPNTVVAHATYAMNSYYQLTGRHSYDCDFAQTGFLTQEDPSYGVC | |||
GH17 | 96 | 290 | 0 |
IGVNYGRMGDNLPPPSEVAKFLQTTNIDKVKLFDADPSVLQAFADTNIAVVVAVANDEIPALNKLPAAQDWVKKNVAPYVPATNIIAISVGNEILSTGNK VLISQLIPAMQNLHTALVGASLDKQIKVSTPHSLGILAASEPPSIGRFRRGYDRVILKPLLNFLRTTGAPFMINPYPYFGYTDKTLDYALFKPNA |
Full Sequence |
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Protein Sequence Length: 480 Download |
MVSSLLISSP SPSTSNIHMV ETSSVSVMSS SSGASNTRTE ANLRQSMRAN MDIRRISGPL 60 SSNNNLGGLM GEKLGSRGLF MLLVLVLCIF FTAEAIGVNY GRMGDNLPPP SEVAKFLQTT 120 NIDKVKLFDA DPSVLQAFAD TNIAVVVAVA NDEIPALNKL PAAQDWVKKN VAPYVPATNI 180 IAISVGNEIL STGNKVLISQ LIPAMQNLHT ALVGASLDKQ IKVSTPHSLG ILAASEPPSI 240 GRFRRGYDRV ILKPLLNFLR TTGAPFMINP YPYFGYTDKT LDYALFKPNA GTPLMPNKTF 300 DTYIFSLFNE DLKPGPIAER NFGLFKPDMT MVYDVGLLKS ESATPAPIST APVTPTSPAP 360 ISTAPVTPTT PAPISTAPVT PTTPAPVTGT DKSWCVAKPD ADPKVLQANI DYACGQGVDC 420 SPIQSGGSCF TPNTVVAHAT YAMNSYYQLT GRHSYDCDFA QTGFLTQEDP SYGVCVYQAT 480 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-26 | 393 | 463 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-44 | 393 | 477 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-53 | 96 | 309 | 219 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24695.1 | 0 | 70 | 291 | 1 | 222 | unknown [Picea sitchensis] |
GenBank | ABK24695.1 | 0 | 285 | 480 | 290 | 485 | unknown [Picea sitchensis] |
GenBank | ABK25242.1 | 0 | 95 | 478 | 39 | 489 | unknown [Picea sitchensis] |
RefSeq | XP_002283660.1 | 0 | 74 | 477 | 4 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002526252.1 | 0 | 96 | 471 | 31 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 4.99997e-41 | 96 | 286 | 1 | 193 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2cyg_A | 0.000003 | 290 | 335 | 266 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 7e-36 | 96 | 286 | 2 | 197 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 7e-36 | 96 | 286 | 2 | 197 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 7e-36 | 96 | 286 | 2 | 197 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |