y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F01563.2 |
Family | CBM43 |
Protein Properties | Length: 475 Molecular Weight: 50238.8 Isoelectric Point: 5.7325 |
Chromosome | Chromosome/Scaffold: 6 Start: 20010826 End: 20014252 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 386 | 467 | 3.8e-33 |
WCIPKSGVSDAQLQANLDYACGQGIDCRPIQPGGACFEPNTLAAHAAYAMNLYYQNSNRSPTNCDFSQSATFSSNNPSYNGC | |||
GH17 | 28 | 343 | 0 |
IGVNYGQVADNLPQPSATAKLLQSTSIEKVRLYGTDPAIIGALANTGIGIVIGAANGDIPALANDPNFAKNWVNANVVPFYPSSKIILITVGNEVMTSGD HNLMTQLLPAMQNMQNALNAVSLGGKIKVSSVHSMAVLKSSEPPSSGSFDPSDEMKGILGFNNATGSPFAINPYPYFAYRSDPRPETLAFCLFQPNAGRL DTKTQIKYTNMFDAQVDAVRSALNSFGYKNVEIVVAETGWPYKGDSNEVGPSIENAKAYNGNLIAHLRSLVGTPLMPGISVDTYLFALYDEDLKPGPTSE RAFGLFKSDLSMNYDI |
Full Sequence |
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Protein Sequence Length: 475 Download |
MAIPPLATLV LLVVLSQASC FANSQSFIGV NYGQVADNLP QPSATAKLLQ STSIEKVRLY 60 GTDPAIIGAL ANTGIGIVIG AANGDIPALA NDPNFAKNWV NANVVPFYPS SKIILITVGN 120 EVMTSGDHNL MTQLLPAMQN MQNALNAVSL GGKIKVSSVH SMAVLKSSEP PSSGSFDPSD 180 EMKGILGFNN ATGSPFAINP YPYFAYRSDP RPETLAFCLF QPNAGRLDTK TQIKYTNMFD 240 AQVDAVRSAL NSFGYKNVEI VVAETGWPYK GDSNEVGPSI ENAKAYNGNL IAHLRSLVGT 300 PLMPGISVDT YLFALYDEDL KPGPTSERAF GLFKSDLSMN YDIGLSKSSQ TPAAPKMPAA 360 PSPNATVTPS PNATVTPSPK PDKANWCIPK SGVSDAQLQA NLDYACGQGI DCRPIQPGGA 420 CFEPNTLAAH AAYAMNLYYQ NSNRSPTNCD FSQSATFSSN NPSYNGCVYP SGKS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-8 | 16 | 336 | 337 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-24 | 386 | 456 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 386 | 469 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-90 | 28 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 8 | 474 | 4 | 456 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 23 | 470 | 54 | 488 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 7 | 474 | 7 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 21 | 474 | 21 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002510373.1 | 0 | 11 | 474 | 12 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 333 | 1 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |