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Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 73476 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 49976.3 Isoelectric Point: 9.1633 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 452 | 4.4e-28 |
WCIAKPGADAAALEKGITFACAEGGIDCSPIQSNGSCFDPQIAFSHASFVYNSYFQKMGRNSWNCYFQDTAMITITDPSK | |||
GH17 | 3 | 323 | 0 |
VGVNYGRIADNLPPPNQVLQLLTSATDIRKVKLFDAEPSVLSAFSNTDFSLVVSAPNYMLSDLASDQSKALNWLTSSVASFYPATNITHIAVGNEVFSQT DGALKANLLPAMKNVYSALEKLKLHKRIKVSTPHAMSVLSSSFPPSNGSFSDTTRASLMPPLLQFLNDTGNPFMINVYPFFAYSTSPKSVSLDFVLFRST KGELDPMSGLSYANMFDAQLDAVHFAMQSLGFDRIPLLVSETGWPSSGDDSETGASVENAREYIRNLVKHVTSTSGTTPVRPSSPTEVYIFALFNEDQKP GPKSERNFGLFQPNGSPVYSS |
Full Sequence |
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Protein Sequence Length: 459 Download |
SKVGVNYGRI ADNLPPPNQV LQLLTSATDI RKVKLFDAEP SVLSAFSNTD FSLVVSAPNY 60 MLSDLASDQS KALNWLTSSV ASFYPATNIT HIAVGNEVFS QTDGALKANL LPAMKNVYSA 120 LEKLKLHKRI KVSTPHAMSV LSSSFPPSNG SFSDTTRASL MPPLLQFLND TGNPFMINVY 180 PFFAYSTSPK SVSLDFVLFR STKGELDPMS GLSYANMFDA QLDAVHFAMQ SLGFDRIPLL 240 VSETGWPSSG DDSETGASVE NAREYIRNLV KHVTSTSGTT PVRPSSPTEV YIFALFNEDQ 300 KPGPKSERNF GLFQPNGSPV YSSDVLRSGS NGSGTSGAAS KSKRRKKRSI NPPRQHHHHQ 360 KMYRSSASSV RQWCIAKPGA DAAALEKGIT FACAEGGIDC SPIQSNGSCF DPQIAFSHAS 420 FVYNSYFQKM GRNSWNCYFQ DTAMITITDP SKRKPYPD* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 237 | 313 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-20 | 372 | 444 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-34 | 372 | 451 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-88 | 3 | 324 | 322 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24319.1 | 0 | 3 | 451 | 40 | 482 | unknown [Picea sitchensis] |
GenBank | ABK25242.1 | 0 | 3 | 451 | 40 | 482 | unknown [Picea sitchensis] |
RefSeq | XP_001761806.1 | 0 | 3 | 451 | 34 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002318439.1 | 0 | 3 | 451 | 32 | 457 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 3 | 451 | 24 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 3 | 321 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 3 | 322 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 3 | 322 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 2 | 316 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 2 | 316 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782823 | 431 | 27 | 453 | 0 |
HO781349 | 425 | 27 | 451 | 0 |
HO796302 | 421 | 31 | 451 | 0 |
CV145152 | 286 | 30 | 315 | 0 |
EX658320 | 287 | 33 | 319 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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