dbCAN Logo

Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3406085_bin.8
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
Coriobacteriaceae
→
Genus
Collinsella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3406085_bin.8 1,879,461 99.19% 0% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3406085_bin.8_CGC13 CGCFAM_00010 Yes 10 2 alpha-glucan
ShaoY_2019_ERR3406085_bin.8_CGC8 CGCFAM_00089 Yes 4 1
ShaoY_2019_ERR3406085_bin.8_CGC2 CGCFAM_00191 Yes 11 2
ShaoY_2019_ERR3406085_bin.8_CGC4 CGCFAM_00289 Yes 8 1
ShaoY_2019_ERR3406085_bin.8_CGC10 CGCFAM_00392 Yes 3 1
ShaoY_2019_ERR3406085_bin.8_CGC1 CGCFAM_04184 Yes 8 2
ShaoY_2019_ERR3406085_bin.8_CGC7 CGCFAM_08029 Yes 6 1
ShaoY_2019_ERR3406085_bin.8_CGC12 CGCFAM_08030 Yes 11 1
Top CAZyme Families