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Cluster: ShaoY_2019_ERR3406085_bin.8_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_88 102392 103165 - 3.A.1.3.20
TC ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_89 103169 104362 - 3.A.1.3.20
TC ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_90 104529 105449 - 3.A.1.3.20
pfam ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_91 105776 106609 + Hydrolase_3
sulfatase ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_92 106745 109552 - S1_2
CAZyme ShaoY_2019_ERR3406085_bin.8_k141_17433 ShaoY_2019_ERR3406085_bin.8_k141_17433_93 109705 110838 - GT2
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_88
Type: TC
Location: 102392 - 103165 (-)
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_89
Type: TC
Location: 103169 - 104362 (-)
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_90
Type: TC
Location: 104529 - 105449 (-)
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_91
Type: pfam
Location: 105776 - 106609 (+)
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_92
Type: sulfatase
Location: 106745 - 109552 (-)
Gene ID: ShaoY_2019_ERR3406085_bin.8_k141_17433_93
Type: CAZyme
Location: 109705 - 110838 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3406085_bin.8_k141_17433_88 vegetarian > vegan 1.09043 0.00364

🧭 Explore Read Mapping of CGC

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