Genome Details
Selected Rep_genome_ID: SPMP65_bin.7
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| SPMP65_bin.7 | 1,920,861 | 92.62% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SPMP65_bin.7_CGC14 | CGCFAM_00012 | Yes | 5 | 2 | host glycan/beta-glucan |
| SPMP65_bin.7_CGC21 | CGCFAM_01534 | Yes | 4 | 2 | |
| SPMP65_bin.7_CGC11 | CGCFAM_02459 | Yes | 9 | 3 | |
| SPMP65_bin.7_CGC26 | CGCFAM_08797 | Yes | 4 | 2 | |
| SPMP65_bin.7_CGC18 | CGCFAM_08798 | Yes | 14 | 1 |
Top CAZyme Families