Cluster: SPMP65_bin.7_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- CGC Family ID: CGCFAM_08797
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110549 | opera_contig_110549_43 | 48529 | 49881 | + | 2.A.8.1.1 |
| peptidase | opera_contig_110549 | opera_contig_110549_44 | 50329 | 51318 | + | S09.UNW |
| CAZyme | opera_contig_110549 | opera_contig_110549_45 | 51781 | 52425 | + | CBM50 |
| CAZyme | opera_contig_110549 | opera_contig_110549_46 | 52664 | 53338 | + | CBM50 |
Gene ID: opera_contig_110549_43
Type: TC
Location: 48529 - 49881 (+)
Type: TC
Location: 48529 - 49881 (+)
Gene ID: opera_contig_110549_44
Type: peptidase
Location: 50329 - 51318 (+)
Type: peptidase
Location: 50329 - 51318 (+)
Gene ID: opera_contig_110549_45
Type: CAZyme
Location: 51781 - 52425 (+)
Type: CAZyme
Location: 51781 - 52425 (+)
Gene ID: opera_contig_110549_46
Type: CAZyme
Location: 52664 - 53338 (+)
Type: CAZyme
Location: 52664 - 53338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.