Genome Details
Selected Rep_genome_ID: Rep_769
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG055_50 | 1,858,365 | 98.92% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR077820 | 1,713,004 | 98.92% | 0% | China | Asia | CGMR |
| GCA_021615775.1_ASM2161577v1_genomic | 1,812,967 | 98.92% | 0% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3311 | 1,780,656 | 98.92% | 0% | Japan | Asia | HRGM |
| MGYG000004639 | 1,878,053 | 98.92% | 0% | Germany | Europe | UHGG |
| Rep_769 | 1,830,157 | 98.9247% | 0% | NA | NA | WIS |
| VatanenT_2016_SRR4408248_bin.1 | 1,779,974 | 98.92% | 0% | Estonia | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_769_CGC13 | CGCFAM_00472 | Yes | 6 | 3 | |
| Rep_769_CGC6 | CGCFAM_01714 | Yes | 5 | 1 | |
| Rep_769_CGC16 | CGCFAM_03552 | Yes | 4 | 1 | |
| Rep_769_CGC12 | CGCFAM_03730 | Yes | 5 | 1 | |
| Rep_769_CGC1 | CGCFAM_04502 | Yes | 7 | 1 |
Top CAZyme Families