Cluster: Rep_769_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- CGC Family ID: CGCFAM_03552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_769_c_0 | Rep_769_c_0_1678 | 1735737 | 1736699 | - | 3.A.15.2.1 |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_1679 | 1736890 | 1738152 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_769_c_0 | Rep_769_c_0_1680 | 1738207 | 1738473 | + | 0044030 |
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1681 | 1738503 | 1739636 | - | GT4 |
Gene ID: Rep_769_c_0_1678
Type: TC
Location: 1735737 - 1736699 (-)
Type: TC
Location: 1735737 - 1736699 (-)
Gene ID: Rep_769_c_0_1679
Type:
Location: 1736890 - 1738152 (+)
Type:
Location: 1736890 - 1738152 (+)
Gene ID: Rep_769_c_0_1680
Type: TF
Location: 1738207 - 1738473 (+)
Type: TF
Location: 1738207 - 1738473 (+)
Gene ID: Rep_769_c_0_1681
Type: CAZyme
Location: 1738503 - 1739636 (-)
Type: CAZyme
Location: 1738503 - 1739636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.