Cluster: Rep_769_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- CGC Family ID: CGCFAM_01714
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_769_c_0 | Rep_769_c_0_699 | 709661 | 711700 | - | GT5 |
| pfam | Rep_769_c_0 | Rep_769_c_0_700 | 711857 | 712447 | + | GrpE |
| TC | Rep_769_c_0 | Rep_769_c_0_701 | 712520 | 714289 | - | 3.D.1.5.1 |
| TC | Rep_769_c_0 | Rep_769_c_0_702 | 714292 | 715983 | - | 3.D.1.5.1 |
| TC | Rep_769_c_0 | Rep_769_c_0_703 | 715988 | 716461 | - | 3.D.1.6.4 |
Gene ID: Rep_769_c_0_699
Type: CAZyme
Location: 709661 - 711700 (-)
Type: CAZyme
Location: 709661 - 711700 (-)
Gene ID: Rep_769_c_0_700
Type: pfam
Location: 711857 - 712447 (+)
Type: pfam
Location: 711857 - 712447 (+)
Gene ID: Rep_769_c_0_701
Type: TC
Location: 712520 - 714289 (-)
Type: TC
Location: 712520 - 714289 (-)
Gene ID: Rep_769_c_0_702
Type: TC
Location: 714292 - 715983 (-)
Type: TC
Location: 714292 - 715983 (-)
Gene ID: Rep_769_c_0_703
Type: TC
Location: 715988 - 716461 (-)
Type: TC
Location: 715988 - 716461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.