Cluster: Rep_769_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- CGC Family ID: CGCFAM_03730
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1284 | 1332184 | 1333335 | - | GT4 |
| peptidase | Rep_769_c_0 | Rep_769_c_0_1285 | 1333388 | 1334161 | + | S09.UPW |
| TC | Rep_769_c_0 | Rep_769_c_0_1286 | 1334248 | 1335438 | + | 2.A.6.2.24 |
| TC | Rep_769_c_0 | Rep_769_c_0_1287 | 1335438 | 1338653 | + | 2.A.6.2.22 |
| TC | Rep_769_c_0 | Rep_769_c_0_1288 | 1338646 | 1340088 | + | 2.A.6.2.14 |
Gene ID: Rep_769_c_0_1284
Type: CAZyme
Location: 1332184 - 1333335 (-)
Type: CAZyme
Location: 1332184 - 1333335 (-)
Gene ID: Rep_769_c_0_1285
Type: peptidase
Location: 1333388 - 1334161 (+)
Type: peptidase
Location: 1333388 - 1334161 (+)
Gene ID: Rep_769_c_0_1286
Type: TC
Location: 1334248 - 1335438 (+)
Type: TC
Location: 1334248 - 1335438 (+)
Gene ID: Rep_769_c_0_1287
Type: TC
Location: 1335438 - 1338653 (+)
Type: TC
Location: 1335438 - 1338653 (+)
Gene ID: Rep_769_c_0_1288
Type: TC
Location: 1338646 - 1340088 (+)
Type: TC
Location: 1338646 - 1340088 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.