Genome Details
Selected Rep_genome_ID: Rep_555
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp905196875
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_555 | 5,309,957 | 91.9231% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_555_CGC106 | CGCFAM_00001 | Yes | 6 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC17 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC48 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC5 | CGCFAM_00001 | Yes | 6 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC51 | CGCFAM_00001 | Yes | 7 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC62 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC70 | CGCFAM_00001 | Yes | 5 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC76 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC97 | CGCFAM_00001 | Yes | 6 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_555_CGC86 | CGCFAM_00007 | Yes | 3 | 1 | |
| Rep_555_CGC18 | CGCFAM_00017 | Yes | 6 | 3 | fructan |
| Rep_555_CGC8 | CGCFAM_00017 | Yes | 6 | 2 | fructan |
| Rep_555_CGC67 | CGCFAM_00082 | Yes | 6 | 1 | beta-mannan |
| Rep_555_CGC3 | CGCFAM_00150 | Yes | 7 | 1 | |
| Rep_555_CGC33 | CGCFAM_00158 | Yes | 16 | 5 | |
| Rep_555_CGC74 | CGCFAM_00256 | Yes | 7 | 2 | |
| Rep_555_CGC78 | CGCFAM_00267 | Yes | 3 | 1 | |
| Rep_555_CGC110 | CGCFAM_00274 | Yes | 5 | 2 | |
| Rep_555_CGC101 | CGCFAM_00301 | Yes | 4 | 1 | |
| Rep_555_CGC45 | CGCFAM_00301 | Yes | 6 | 3 | |
| Rep_555_CGC93 | CGCFAM_00303 | Yes | 6 | 1 | |
| Rep_555_CGC108 | CGCFAM_00304 | Yes | 7 | 1 | |
| Rep_555_CGC80 | CGCFAM_00365 | Yes | 7 | 3 | host glycan |
| Rep_555_CGC41 | CGCFAM_00375 | Yes | 5 | 1 | |
| Rep_555_CGC10 | CGCFAM_00388 | Yes | 3 | 1 |
Top CAZyme Families