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Cluster: Rep_555_CGC93

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_61 Rep_555_c_61_3 547 3678 + 2.A.21.9.2
TF Rep_555_c_61 Rep_555_c_61_4 3924 4289 - HTH_3
pfam Rep_555_c_61 Rep_555_c_61_5 4295 4588 - HigB_toxin
CAZyme Rep_555_c_61 Rep_555_c_61_6 4824 6503 - GH165
sulfatase Rep_555_c_61 Rep_555_c_61_7 6521 8209 - S1_27
TC Rep_555_c_61 Rep_555_c_61_8 8222 11566 - 1.B.14.6.1
Gene ID: Rep_555_c_61_3
Type: TC
Location: 547 - 3678 (+)
Gene ID: Rep_555_c_61_4
Type: TF
Location: 3924 - 4289 (-)
Gene ID: Rep_555_c_61_5
Type: pfam
Location: 4295 - 4588 (-)
Gene ID: Rep_555_c_61_6
Type: CAZyme
Location: 4824 - 6503 (-)
Gene ID: Rep_555_c_61_7
Type: sulfatase
Location: 6521 - 8209 (-)
Gene ID: Rep_555_c_61_8
Type: TC
Location: 8222 - 11566 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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