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Cluster: Rep_555_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_0 Rep_555_c_0_66 98449 101793 + 1.B.14.6.2
TC Rep_555_c_0 Rep_555_c_0_67 101808 103430 + 8.A.46.2.4
CAZyme Rep_555_c_0 Rep_555_c_0_68 103441 105390 + GH97
STP Rep_555_c_0 Rep_555_c_0_69 105593 106207 + Sigma70_r2 | Sigma70_r4_2
STP Rep_555_c_0 Rep_555_c_0_70 106444 107442 + FecR
TC Rep_555_c_0 Rep_555_c_0_71 107492 110740 + 1.B.14.6.1
TC Rep_555_c_0 Rep_555_c_0_72 110759 112306 + 8.A.46.1.3
Gene ID: Rep_555_c_0_66
Type: TC
Location: 98449 - 101793 (+)
Gene ID: Rep_555_c_0_67
Type: TC
Location: 101808 - 103430 (+)
Gene ID: Rep_555_c_0_68
Type: CAZyme
Location: 103441 - 105390 (+)
Gene ID: Rep_555_c_0_69
Type: STP
Location: 105593 - 106207 (+)
Gene ID: Rep_555_c_0_70
Type: STP
Location: 106444 - 107442 (+)
Gene ID: Rep_555_c_0_71
Type: TC
Location: 107492 - 110740 (+)
Gene ID: Rep_555_c_0_72
Type: TC
Location: 110759 - 112306 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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