Cluster: Rep_555_CGC67
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: Rep_555
- CGC Family ID: CGCFAM_00082
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_555_c_26 | Rep_555_c_26_10 | 14286 | 17570 | + | 1.B.14.6.2 |
| TC | Rep_555_c_26 | Rep_555_c_26_11 | 17608 | 19218 | + | 8.A.46.2.2 |
| CAZyme | Rep_555_c_26 | Rep_555_c_26_12 | 19340 | 21739 | + | GH3 |
| TF | Rep_555_c_26 | Rep_555_c_26_13 | 21883 | 22464 | + | GerE |
| STP | Rep_555_c_26 | Rep_555_c_26_14 | 22607 | 23536 | + | FecR |
| TC | Rep_555_c_26 | Rep_555_c_26_15 | 23704 | 27111 | + | 1.B.14.6.2 |
Gene ID: Rep_555_c_26_10
Type: TC
Location: 14286 - 17570 (+)
Type: TC
Location: 14286 - 17570 (+)
Gene ID: Rep_555_c_26_11
Type: TC
Location: 17608 - 19218 (+)
Type: TC
Location: 17608 - 19218 (+)
Gene ID: Rep_555_c_26_12
Type: CAZyme
Location: 19340 - 21739 (+)
Type: CAZyme
Location: 19340 - 21739 (+)
Gene ID: Rep_555_c_26_13
Type: TF
Location: 21883 - 22464 (+)
Type: TF
Location: 21883 - 22464 (+)
Gene ID: Rep_555_c_26_14
Type: STP
Location: 22607 - 23536 (+)
Type: STP
Location: 22607 - 23536 (+)
Gene ID: Rep_555_c_26_15
Type: TC
Location: 23704 - 27111 (+)
Type: TC
Location: 23704 - 27111 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp905196875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.