Genome Details
Selected Rep_genome_ID: Rep_3432
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C111.CMAG_3 | 2,435,994 | 99.33% | 0.34% | China(Inner Mongolia) | Asia | IMGG |
| GCA_021615595.1_ASM2161559v1_genomic | 2,164,299 | 93.96% | 0.56% | NA | Africa | H3AfricaPhase1 |
| GCA_021621405.1_ASM2162140v1_genomic | 1,692,537 | 95.13% | 0.34% | NA | Africa | H3AfricaPhase1 |
| KY016_bin.60 | 2,079,883 | 98.32% | 0% | NA | Africa | H3AfricaPhase2 |
| Rep_3432 | 2,287,894 | 99.3289% | 0.33557% | NA | NA | WIS |
| SPMP102_bin.20 | 2,177,916 | 96.92% | 0.34% | Singapore | Asia | SPMP |
| SPMP18_bin.7 | 2,247,749 | 99.14% | 0.34% | Singapore | Asia | SPMP |
| SPMP30_bin.4 | 2,251,897 | 97.32% | 0.34% | Singapore | Asia | SPMP |
| SPMP31_bin.175 | 2,187,826 | 98.66% | 1.01% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3432_CGC18 | CGCFAM_00328 | Yes | 6 | 1 | |
| Rep_3432_CGC7 | CGCFAM_04071 | Yes | 11 | 3 | |
| Rep_3432_CGC1 | CGCFAM_06174 | Yes | 8 | 1 | |
| Rep_3432_CGC16 | CGCFAM_06175 | Yes | 5 | 2 | |
| Rep_3432_CGC3 | CGCFAM_10186 | Yes | 7 | 1 |
Top CAZyme Families