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Cluster: Rep_3432_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3432_c_0 Rep_3432_c_0_396 480686 481558 + 2.A.115.1.1
TC Rep_3432_c_0 Rep_3432_c_0_397 481588 482886 + 2.A.86.1.8
pfam Rep_3432_c_0 Rep_3432_c_0_398 482899 484416 + PPK2 | PPK2
CAZyme Rep_3432_c_0 Rep_3432_c_0_399 484805 488161 + CBM26 | GH13_28
NULL(UNKNOWN) Rep_3432_c_0 Rep_3432_c_0_400 488320 488862 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_3432_c_0 Rep_3432_c_0_401 488859 489188 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3432_c_0 Rep_3432_c_0_402 489417 490280 + 8.A.21.2.3
Gene ID: Rep_3432_c_0_396
Type: TC
Location: 480686 - 481558 (+)
Gene ID: Rep_3432_c_0_397
Type: TC
Location: 481588 - 482886 (+)
Gene ID: Rep_3432_c_0_398
Type: pfam
Location: 482899 - 484416 (+)
Gene ID: Rep_3432_c_0_399
Type: CAZyme
Location: 484805 - 488161 (+)
Gene ID: Rep_3432_c_0_400
Type:
Location: 488320 - 488862 (+)
Gene ID: Rep_3432_c_0_401
Type:
Location: 488859 - 489188 (+)
Gene ID: Rep_3432_c_0_402
Type: TC
Location: 489417 - 490280 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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