dbCAN Logo

Cluster: Rep_3432_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3432_c_0 Rep_3432_c_0_329 389031 389993 + GT2
pfam Rep_3432_c_0 Rep_3432_c_0_330 390058 390756 - DNA_alkylation
TC Rep_3432_c_0 Rep_3432_c_0_331 390753 392474 - 8.A.7.1.1
STP Rep_3432_c_0 Rep_3432_c_0_332 393320 393586 - PTS-HPr
TC Rep_3432_c_0 Rep_3432_c_0_333 393632 395605 - 4.A.2.1.7
TC Rep_3432_c_0 Rep_3432_c_0_334 395873 398539 + 3.A.3.2.21
TC Rep_3432_c_0 Rep_3432_c_0_335 398935 401166 + 3.A.1.135.7
TC Rep_3432_c_0 Rep_3432_c_0_336 401163 403049 + 3.A.1.135.6
Gene ID: Rep_3432_c_0_329
Type: CAZyme
Location: 389031 - 389993 (+)
Gene ID: Rep_3432_c_0_330
Type: pfam
Location: 390058 - 390756 (-)
Gene ID: Rep_3432_c_0_331
Type: TC
Location: 390753 - 392474 (-)
Gene ID: Rep_3432_c_0_332
Type: STP
Location: 393320 - 393586 (-)
Gene ID: Rep_3432_c_0_333
Type: TC
Location: 393632 - 395605 (-)
Gene ID: Rep_3432_c_0_334
Type: TC
Location: 395873 - 398539 (+)
Gene ID: Rep_3432_c_0_335
Type: TC
Location: 398935 - 401166 (+)
Gene ID: Rep_3432_c_0_336
Type: TC
Location: 401163 - 403049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List