Genome Details
Selected Rep_genome_ID: Rep_3382
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A31.bin_38 | 2,225,954 | 94.63% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_2750 | 2,156,361 | 98.65% | 0.671% | South Korea | Asia | HRGM |
| MGYG000001057 | 2,192,208 | 98.66% | 0.67% | Spain | Europe | UHGG |
| Rep_3382 | 2,424,487 | 98.434% | 0.671141% | NA | NA | WIS |
| SPMP05_bin.7 | 2,313,191 | 97.99% | 1.34% | Singapore | Asia | SPMP |
| SPMP17_bin.66 | 1,898,660 | 90.16% | 1.57% | Singapore | Asia | SPMP |
| SPMP95_bin.11 | 2,340,095 | 97.99% | 0.67% | Singapore | Asia | SPMP |
| SW103_19 | 2,150,677 | 97.48% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3382_CGC2 | CGCFAM_01091 | Yes | 5 | 2 | |
| Rep_3382_CGC14 | CGCFAM_01624 | Yes | 6 | 1 | |
| Rep_3382_CGC10 | CGCFAM_02064 | Yes | 5 | 1 | |
| Rep_3382_CGC9 | CGCFAM_02342 | Yes | 4 | 1 | |
| Rep_3382_CGC12 | CGCFAM_03233 | Yes | 4 | 1 | |
| Rep_3382_CGC8 | CGCFAM_07034 | Yes | 11 | 1 |
Top CAZyme Families