Cluster: Rep_3382_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3382
- CGC Family ID: CGCFAM_01091
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_0 | Rep_3382_c_0_422 | 374362 | 375045 | + | 9.B.18.1.3 |
| CAZyme | Rep_3382_c_0 | Rep_3382_c_0_423 | 375078 | 376328 | + | GT4 |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_424 | 376373 | 377224 | + | Glyco_transf_4 | Glyco_trans_4_4 |
| pfam | Rep_3382_c_0 | Rep_3382_c_0_425 | 377181 | 377510 | + | Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 |
| CAZyme | Rep_3382_c_0 | Rep_3382_c_0_426 | 377544 | 378752 | + | GT4 |
Gene ID: Rep_3382_c_0_422
Type: TC
Location: 374362 - 375045 (+)
Type: TC
Location: 374362 - 375045 (+)
Gene ID: Rep_3382_c_0_423
Type: CAZyme
Location: 375078 - 376328 (+)
Type: CAZyme
Location: 375078 - 376328 (+)
Gene ID: Rep_3382_c_0_424
Type: pfam
Location: 376373 - 377224 (+)
Type: pfam
Location: 376373 - 377224 (+)
Gene ID: Rep_3382_c_0_425
Type: pfam
Location: 377181 - 377510 (+)
Type: pfam
Location: 377181 - 377510 (+)
Gene ID: Rep_3382_c_0_426
Type: CAZyme
Location: 377544 - 378752 (+)
Type: CAZyme
Location: 377544 - 378752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.