Cluster: Rep_3382_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3382
- CGC Family ID: CGCFAM_02064
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_2 | Rep_3382_c_2_228 | 216753 | 217508 | - | 3.A.1.3.13 |
| TC | Rep_3382_c_2 | Rep_3382_c_2_229 | 217534 | 218205 | - | 3.A.1.3.10 |
| TC | Rep_3382_c_2 | Rep_3382_c_2_230 | 218348 | 219157 | - | 3.A.1.3.25 |
| TC | Rep_3382_c_2 | Rep_3382_c_2_231 | 219393 | 221354 | - | 4.D.2.1.7 |
| CAZyme | Rep_3382_c_2 | Rep_3382_c_2_232 | 221351 | 222472 | - | GT4 |
Gene ID: Rep_3382_c_2_228
Type: TC
Location: 216753 - 217508 (-)
Type: TC
Location: 216753 - 217508 (-)
Gene ID: Rep_3382_c_2_229
Type: TC
Location: 217534 - 218205 (-)
Type: TC
Location: 217534 - 218205 (-)
Gene ID: Rep_3382_c_2_230
Type: TC
Location: 218348 - 219157 (-)
Type: TC
Location: 218348 - 219157 (-)
Gene ID: Rep_3382_c_2_231
Type: TC
Location: 219393 - 221354 (-)
Type: TC
Location: 219393 - 221354 (-)
Gene ID: Rep_3382_c_2_232
Type: CAZyme
Location: 221351 - 222472 (-)
Type: CAZyme
Location: 221351 - 222472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.