Cluster: Rep_3382_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3382
- CGC Family ID: CGCFAM_02342
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_2 | Rep_3382_c_2_128 | 120043 | 121389 | + | 2.A.66.1.34 |
| STP | Rep_3382_c_2 | Rep_3382_c_2_129 | 121724 | 123208 | - | HATPase_c | HisKA |
| TF | Rep_3382_c_2 | Rep_3382_c_2_130 | 123198 | 123869 | - | Trans_reg_C |
| CAZyme | Rep_3382_c_2 | Rep_3382_c_2_131 | 124190 | 126553 | - | GT51 |
Gene ID: Rep_3382_c_2_128
Type: TC
Location: 120043 - 121389 (+)
Type: TC
Location: 120043 - 121389 (+)
Gene ID: Rep_3382_c_2_129
Type: STP
Location: 121724 - 123208 (-)
Type: STP
Location: 121724 - 123208 (-)
Gene ID: Rep_3382_c_2_130
Type: TF
Location: 123198 - 123869 (-)
Type: TF
Location: 123198 - 123869 (-)
Gene ID: Rep_3382_c_2_131
Type: CAZyme
Location: 124190 - 126553 (-)
Type: CAZyme
Location: 124190 - 126553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.