Cluster: Rep_3382_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3382
- CGC Family ID: CGCFAM_01624
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3382_c_2 | Rep_3382_c_2_514 | 537919 | 539667 | - | 3.A.1.135.5 |
| TC | Rep_3382_c_2 | Rep_3382_c_2_515 | 539667 | 541406 | - | 3.A.1.135.5 |
| TF | Rep_3382_c_2 | Rep_3382_c_2_516 | 541546 | 542445 | + | HTH_1 |
| CAZyme | Rep_3382_c_2 | Rep_3382_c_2_517 | 542461 | 543291 | + | GT8 |
| sulfatase | Rep_3382_c_2 | Rep_3382_c_2_518 | 543451 | 545271 | + | S1_97 |
| TC | Rep_3382_c_2 | Rep_3382_c_2_519 | 545343 | 546704 | - | 2.A.66.1.23 |
Gene ID: Rep_3382_c_2_514
Type: TC
Location: 537919 - 539667 (-)
Type: TC
Location: 537919 - 539667 (-)
Gene ID: Rep_3382_c_2_515
Type: TC
Location: 539667 - 541406 (-)
Type: TC
Location: 539667 - 541406 (-)
Gene ID: Rep_3382_c_2_516
Type: TF
Location: 541546 - 542445 (+)
Type: TF
Location: 541546 - 542445 (+)
Gene ID: Rep_3382_c_2_517
Type: CAZyme
Location: 542461 - 543291 (+)
Type: CAZyme
Location: 542461 - 543291 (+)
Gene ID: Rep_3382_c_2_518
Type: sulfatase
Location: 543451 - 545271 (+)
Type: sulfatase
Location: 543451 - 545271 (+)
Gene ID: Rep_3382_c_2_519
Type: TC
Location: 545343 - 546704 (-)
Type: TC
Location: 545343 - 546704 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp000435195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.