dbCAN Logo

Genome Details

Selected Rep_genome_ID: Rep_2390
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A36.bin_10 2,930,865 98.66% 0% China(Inner Mongolia) Asia IMGG
BF200_4 2,797,510 97.99% 1.57% NA Africa H3AfricaPhase2
CGMR069858 2,605,067 98.66% 0% China Asia CGMR
CokerMO_2019_SRR8692221_bin.31 2,405,818 91.17% 2.149% US North America ELGG
HRGMv2_2072 2,747,863 98.65% 0% South Korea Asia HRGM
MGYG000002633 2,903,436 98.28% 0.02% China Asia UHGG
Rep_2390 3,127,438 98.6577% 0% NA NA WIS
SPMP39_bin.8 2,802,843 98.6% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_2390_CGC29 CGCFAM_00234 Yes 4 2
Rep_2390_CGC36 CGCFAM_00334 Yes 5 1
Rep_2390_CGC8 CGCFAM_00705 Yes 5 1
Rep_2390_CGC5 CGCFAM_00854 Yes 3 1
Rep_2390_CGC3 CGCFAM_01617 Yes 6 2
Rep_2390_CGC28 CGCFAM_01945 Yes 4 1
Rep_2390_CGC23 CGCFAM_02249 Yes 3 1
Rep_2390_CGC33 CGCFAM_02582 Yes 5 2
Rep_2390_CGC2 CGCFAM_02630 Yes 13 2
Rep_2390_CGC27 CGCFAM_03464 Yes 12 2
Rep_2390_CGC11 CGCFAM_03962 Yes 5 2
Rep_2390_CGC32 CGCFAM_04595 Yes 7 1
Rep_2390_CGC25 CGCFAM_05057 Yes 3 1
Rep_2390_CGC22 CGCFAM_06844 Yes 15 2
Rep_2390_CGC9 CGCFAM_07008 Yes 5 1
Top CAZyme Families