Cluster: Rep_2390_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2390
- CGC Family ID: CGCFAM_00234
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2390_c_1 | Rep_2390_c_1_1355 | 1635312 | 1638137 | + | GH2 |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1356 | 1638404 | 1639741 | + | 1.B.52.2.1 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1357 | 1640234 | 1642879 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| CAZyme | Rep_2390_c_1 | Rep_2390_c_1_1358 | 1643235 | 1645637 | + | GH94 |
Gene ID: Rep_2390_c_1_1355
Type: CAZyme
Location: 1635312 - 1638137 (+)
Type: CAZyme
Location: 1635312 - 1638137 (+)
Gene ID: Rep_2390_c_1_1356
Type: TC
Location: 1638404 - 1639741 (+)
Type: TC
Location: 1638404 - 1639741 (+)
Gene ID: Rep_2390_c_1_1357
Type: pfam
Location: 1640234 - 1642879 (+)
Type: pfam
Location: 1640234 - 1642879 (+)
Gene ID: Rep_2390_c_1_1358
Type: CAZyme
Location: 1643235 - 1645637 (+)
Type: CAZyme
Location: 1643235 - 1645637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2390_c_1_1355 | vegan > omnivore | 2.42379 | 0.00241 |
| Rep_2390_c_1_1356 | vegan > omnivore | 1.36739 | 0.00241 |
| Rep_2390_c_1_1358 | vegan > omnivore | 1.23993 | 0.00241 |
| Rep_2390_c_1_1358 | vegetarian > omnivore | 1.32307 | 0.00000 |