Cluster: Rep_2390_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2390
- CGC Family ID: CGCFAM_02630
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2390_c_0 | Rep_2390_c_0_168 | 174945 | 176258 | + | 9.A.40.2.4 |
| pfam | Rep_2390_c_0 | Rep_2390_c_0_169 | 176626 | 177216 | + | Zn_dep_PLPC |
| TC | Rep_2390_c_0 | Rep_2390_c_0_170 | 177533 | 178303 | + | 3.A.1.15.4 |
| TC | Rep_2390_c_0 | Rep_2390_c_0_171 | 178352 | 179188 | + | 3.A.1.15.10 |
| pfam | Rep_2390_c_0 | Rep_2390_c_0_172 | 179217 | 181058 | + | MTHFR | S-methyl_trans |
| pfam | Rep_2390_c_0 | Rep_2390_c_0_173 | 181853 | 182299 | + | YqeY |
| CAZyme | Rep_2390_c_0 | Rep_2390_c_0_174 | 182343 | 183290 | + | GT2 |
| TC | Rep_2390_c_0 | Rep_2390_c_0_175 | 183444 | 185075 | - | 3.A.1.121.4 |
| CAZyme | Rep_2390_c_0 | Rep_2390_c_0_176 | 185385 | 187406 | + | GH13_11 |
| NULL(UNKNOWN) | Rep_2390_c_0 | Rep_2390_c_0_177 | 187570 | 187767 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2390_c_0 | Rep_2390_c_0_178 | 187908 | 188405 | + | DUF5721 |
| TC | Rep_2390_c_0 | Rep_2390_c_0_179 | 188601 | 190352 | + | 3.A.1.135.5 |
| TC | Rep_2390_c_0 | Rep_2390_c_0_180 | 190357 | 192291 | + | 3.A.1.135.5 |
Gene ID: Rep_2390_c_0_168
Type: TC
Location: 174945 - 176258 (+)
Type: TC
Location: 174945 - 176258 (+)
Gene ID: Rep_2390_c_0_169
Type: pfam
Location: 176626 - 177216 (+)
Type: pfam
Location: 176626 - 177216 (+)
Gene ID: Rep_2390_c_0_170
Type: TC
Location: 177533 - 178303 (+)
Type: TC
Location: 177533 - 178303 (+)
Gene ID: Rep_2390_c_0_171
Type: TC
Location: 178352 - 179188 (+)
Type: TC
Location: 178352 - 179188 (+)
Gene ID: Rep_2390_c_0_172
Type: pfam
Location: 179217 - 181058 (+)
Type: pfam
Location: 179217 - 181058 (+)
Gene ID: Rep_2390_c_0_173
Type: pfam
Location: 181853 - 182299 (+)
Type: pfam
Location: 181853 - 182299 (+)
Gene ID: Rep_2390_c_0_174
Type: CAZyme
Location: 182343 - 183290 (+)
Type: CAZyme
Location: 182343 - 183290 (+)
Gene ID: Rep_2390_c_0_175
Type: TC
Location: 183444 - 185075 (-)
Type: TC
Location: 183444 - 185075 (-)
Gene ID: Rep_2390_c_0_176
Type: CAZyme
Location: 185385 - 187406 (+)
Type: CAZyme
Location: 185385 - 187406 (+)
Gene ID: Rep_2390_c_0_177
Type:
Location: 187570 - 187767 (-)
Type:
Location: 187570 - 187767 (-)
Gene ID: Rep_2390_c_0_178
Type: pfam
Location: 187908 - 188405 (+)
Type: pfam
Location: 187908 - 188405 (+)
Gene ID: Rep_2390_c_0_179
Type: TC
Location: 188601 - 190352 (+)
Type: TC
Location: 188601 - 190352 (+)
Gene ID: Rep_2390_c_0_180
Type: TC
Location: 190357 - 192291 (+)
Type: TC
Location: 190357 - 192291 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2390_c_0_168 | vegan > omnivore | 3.10198 | 0.00241 |
| Rep_2390_c_0_168 | vegetarian > omnivore | 2.52086 | 0.00614 |
| Rep_2390_c_0_169 | vegan > omnivore | 3.43604 | 0.00241 |
| Rep_2390_c_0_169 | vegetarian > omnivore | 1.61524 | 0.02960 |
| Rep_2390_c_0_171 | vegan > omnivore | 2.21639 | 0.00241 |
| Rep_2390_c_0_171 | vegetarian > omnivore | 2.00977 | 0.02960 |
| Rep_2390_c_0_173 | vegan > omnivore | 3.33717 | 0.00241 |
| Rep_2390_c_0_173 | vegetarian > omnivore | 2.81650 | 0.02960 |
| Rep_2390_c_0_174 | vegan > omnivore | 2.26973 | 0.00241 |
| Rep_2390_c_0_176 | vegan > omnivore | 2.27265 | 0.00241 |
| Rep_2390_c_0_177 | vegan > omnivore | 4.77553 | 0.00241 |
| Rep_2390_c_0_178 | vegan > omnivore | 15.40986 | 0.00241 |
| Rep_2390_c_0_178 | vegetarian > omnivore | 14.58957 | 0.01720 |