Cluster: Rep_2390_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2390
- CGC Family ID: CGCFAM_00334
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2390_c_1 | Rep_2390_c_1_1856 | 2215680 | 2218718 | + | GH2 |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1857 | 2218879 | 2220261 | + | 2.A.2.3.3 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1858 | 2220659 | 2221171 | + | GHMP_kinases_N |
| TF | Rep_2390_c_1 | Rep_2390_c_1_1859 | 2221462 | 2222256 | + | HTH_AraC |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1860 | 2222367 | 2224214 | + | 9.B.97.5.1 |
Gene ID: Rep_2390_c_1_1856
Type: CAZyme
Location: 2215680 - 2218718 (+)
Type: CAZyme
Location: 2215680 - 2218718 (+)
Gene ID: Rep_2390_c_1_1857
Type: TC
Location: 2218879 - 2220261 (+)
Type: TC
Location: 2218879 - 2220261 (+)
Gene ID: Rep_2390_c_1_1858
Type: pfam
Location: 2220659 - 2221171 (+)
Type: pfam
Location: 2220659 - 2221171 (+)
Gene ID: Rep_2390_c_1_1859
Type: TF
Location: 2221462 - 2222256 (+)
Type: TF
Location: 2221462 - 2222256 (+)
Gene ID: Rep_2390_c_1_1860
Type: TC
Location: 2222367 - 2224214 (+)
Type: TC
Location: 2222367 - 2224214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2390_c_1_1858 | vegan > omnivore | 1.12031 | 0.00241 |
| Rep_2390_c_1_1858 | vegetarian > omnivore | 1.25519 | 0.02960 |