Cluster: Rep_2390_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2390
- CGC Family ID: CGCFAM_03464
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2390_c_1 | Rep_2390_c_1_1221 | 1460454 | 1461212 | + | GT26 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1222 | 1461254 | 1462099 | + | YitT_membrane | DUF2179 |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1223 | 1462337 | 1463449 | + | 3.A.1.1.26 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1224 | 1463696 | 1464784 | + | HTH_30 | GGDEF_2 |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1225 | 1464850 | 1465548 | + | 3.A.1.140.1 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1226 | 1465545 | 1466453 | + | FtsX | FtsX_ECD |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1227 | 1466475 | 1467830 | + | 1.A.34.1.3 |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1228 | 1467909 | 1469123 | + | 9.B.174.1.1 |
| pfam | Rep_2390_c_1 | Rep_2390_c_1_1229 | 1469159 | 1471141 | + | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| CAZyme | Rep_2390_c_1 | Rep_2390_c_1_1230 | 1471339 | 1473573 | + | GH42 |
| NULL(UNKNOWN) | Rep_2390_c_1 | Rep_2390_c_1_1231 | 1473586 | 1473960 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2390_c_1 | Rep_2390_c_1_1232 | 1474143 | 1475279 | - | 8.A.59.4.1 |
Gene ID: Rep_2390_c_1_1221
Type: CAZyme
Location: 1460454 - 1461212 (+)
Type: CAZyme
Location: 1460454 - 1461212 (+)
Gene ID: Rep_2390_c_1_1222
Type: pfam
Location: 1461254 - 1462099 (+)
Type: pfam
Location: 1461254 - 1462099 (+)
Gene ID: Rep_2390_c_1_1223
Type: TC
Location: 1462337 - 1463449 (+)
Type: TC
Location: 1462337 - 1463449 (+)
Gene ID: Rep_2390_c_1_1224
Type: pfam
Location: 1463696 - 1464784 (+)
Type: pfam
Location: 1463696 - 1464784 (+)
Gene ID: Rep_2390_c_1_1225
Type: TC
Location: 1464850 - 1465548 (+)
Type: TC
Location: 1464850 - 1465548 (+)
Gene ID: Rep_2390_c_1_1226
Type: pfam
Location: 1465545 - 1466453 (+)
Type: pfam
Location: 1465545 - 1466453 (+)
Gene ID: Rep_2390_c_1_1227
Type: TC
Location: 1466475 - 1467830 (+)
Type: TC
Location: 1466475 - 1467830 (+)
Gene ID: Rep_2390_c_1_1228
Type: TC
Location: 1467909 - 1469123 (+)
Type: TC
Location: 1467909 - 1469123 (+)
Gene ID: Rep_2390_c_1_1229
Type: pfam
Location: 1469159 - 1471141 (+)
Type: pfam
Location: 1469159 - 1471141 (+)
Gene ID: Rep_2390_c_1_1230
Type: CAZyme
Location: 1471339 - 1473573 (+)
Type: CAZyme
Location: 1471339 - 1473573 (+)
Gene ID: Rep_2390_c_1_1231
Type:
Location: 1473586 - 1473960 (+)
Type:
Location: 1473586 - 1473960 (+)
Gene ID: Rep_2390_c_1_1232
Type: TC
Location: 1474143 - 1475279 (-)
Type: TC
Location: 1474143 - 1475279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyribacter
Species
Butyribacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2390_c_1_1221 | vegan > omnivore | 2.11911 | 0.00241 |
| Rep_2390_c_1_1222 | vegan > omnivore | 1.11422 | 0.00241 |
| Rep_2390_c_1_1226 | vegan > omnivore | 1.80110 | 0.00241 |
| Rep_2390_c_1_1227 | vegan > omnivore | 2.73086 | 0.00241 |
| Rep_2390_c_1_1227 | vegetarian > omnivore | 1.77889 | 0.02960 |
| Rep_2390_c_1_1228 | vegan > omnivore | 1.71513 | 0.00241 |
| Rep_2390_c_1_1228 | vegetarian > omnivore | 1.20782 | 0.02960 |
| Rep_2390_c_1_1230 | vegan > omnivore | 1.56336 | 0.00241 |
| Rep_2390_c_1_1231 | vegan > omnivore | 2.18218 | 0.00241 |
| Rep_2390_c_1_1231 | vegetarian > omnivore | 1.15857 | 0.02960 |
| Rep_2390_c_1_1232 | vegan > omnivore | 1.03987 | 0.00241 |