Genome Details
Selected Rep_genome_ID: Rep_1022
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus paragasseri
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR021693 | 1,926,338 | 99.22% | 0% | China | Asia | CGMR |
| Rep_1022 | 1,944,368 | 99.2248% | 0% | NA | NA | WIS |
| SW124_bin.7 | 1,722,203 | 94.74% | 0.02% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_1022_CGC9 | CGCFAM_00102 | Yes | 4 | 1 | |
| Rep_1022_CGC27 | CGCFAM_00131 | Yes | 7 | 1 | |
| Rep_1022_CGC19 | CGCFAM_00245 | Yes | 4 | 1 | |
| Rep_1022_CGC17 | CGCFAM_00403 | Yes | 11 | 3 | |
| Rep_1022_CGC14 | CGCFAM_03336 | Yes | 12 | 2 | |
| Rep_1022_CGC15 | CGCFAM_04771 | Yes | 6 | 2 | |
| Rep_1022_CGC12 | CGCFAM_04774 | Yes | 9 | 3 | |
| Rep_1022_CGC7 | CGCFAM_04776 | Yes | 15 | 5 | |
| Rep_1022_CGC2 | CGCFAM_04777 | Yes | 18 | 2 |
Top CAZyme Families