dbCAN Logo

Cluster: Rep_1022_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1022_c_0 Rep_1022_c_0_85 90242 91675 - 2.A.3.2.7
pfam Rep_1022_c_0 Rep_1022_c_0_86 91710 92996 - PS_Dcarbxylase | PSDC
CAZyme Rep_1022_c_0 Rep_1022_c_0_87 93422 95458 + GH42
TC Rep_1022_c_0 Rep_1022_c_0_88 95606 97099 + 2.A.17.1.6
TC Rep_1022_c_0 Rep_1022_c_0_89 97252 98484 + 2.A.1.15.9
pfam Rep_1022_c_0 Rep_1022_c_0_90 98582 99433 + DUF915
TF Rep_1022_c_0 Rep_1022_c_0_91 99522 99962 + 0040517
TC Rep_1022_c_0 Rep_1022_c_0_92 99963 101696 + 3.A.1.135.3
TC Rep_1022_c_0 Rep_1022_c_0_93 101689 103458 + 3.A.1.135.8
TC Rep_1022_c_0 Rep_1022_c_0_94 103508 104329 + 3.A.1.3.16
TC Rep_1022_c_0 Rep_1022_c_0_95 104779 105528 + 3.A.1.3.26
TC Rep_1022_c_0 Rep_1022_c_0_96 105530 106354 + 3.A.1.3.16
TC Rep_1022_c_0 Rep_1022_c_0_97 106351 106989 + 3.A.1.3.25
TC Rep_1022_c_0 Rep_1022_c_0_98 107003 107653 + 3.A.1.3.10
NULL(UNKNOWN) Rep_1022_c_0 Rep_1022_c_0_99 107700 108002 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1022_c_0 Rep_1022_c_0_100 108216 109874 - GH13_29
TF Rep_1022_c_0 Rep_1022_c_0_101 109888 110613 - GntR
TC Rep_1022_c_0 Rep_1022_c_0_102 110808 112736 + 4.A.1.2.2
Gene ID: Rep_1022_c_0_85
Type: TC
Location: 90242 - 91675 (-)
Gene ID: Rep_1022_c_0_86
Type: pfam
Location: 91710 - 92996 (-)
Gene ID: Rep_1022_c_0_87
Type: CAZyme
Location: 93422 - 95458 (+)
Gene ID: Rep_1022_c_0_88
Type: TC
Location: 95606 - 97099 (+)
Gene ID: Rep_1022_c_0_89
Type: TC
Location: 97252 - 98484 (+)
Gene ID: Rep_1022_c_0_90
Type: pfam
Location: 98582 - 99433 (+)
Gene ID: Rep_1022_c_0_91
Type: TF
Location: 99522 - 99962 (+)
Gene ID: Rep_1022_c_0_92
Type: TC
Location: 99963 - 101696 (+)
Gene ID: Rep_1022_c_0_93
Type: TC
Location: 101689 - 103458 (+)
Gene ID: Rep_1022_c_0_94
Type: TC
Location: 103508 - 104329 (+)
Gene ID: Rep_1022_c_0_95
Type: TC
Location: 104779 - 105528 (+)
Gene ID: Rep_1022_c_0_96
Type: TC
Location: 105530 - 106354 (+)
Gene ID: Rep_1022_c_0_97
Type: TC
Location: 106351 - 106989 (+)
Gene ID: Rep_1022_c_0_98
Type: TC
Location: 107003 - 107653 (+)
Gene ID: Rep_1022_c_0_99
Type:
Location: 107700 - 108002 (-)
Gene ID: Rep_1022_c_0_100
Type: CAZyme
Location: 108216 - 109874 (-)
Gene ID: Rep_1022_c_0_101
Type: TF
Location: 109888 - 110613 (-)
Gene ID: Rep_1022_c_0_102
Type: TC
Location: 110808 - 112736 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List