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Cluster: Rep_1022_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1022_c_1 Rep_1022_c_1_203 225650 227221 - 2.A.36.6.7
TC Rep_1022_c_1 Rep_1022_c_1_204 227330 228436 + 9.B.141.1.3
TC Rep_1022_c_1 Rep_1022_c_1_205 228433 229194 + 9.B.141.1.2
peptidase Rep_1022_c_1 Rep_1022_c_1_206 229216 230034 + S09.UPW
CAZyme Rep_1022_c_1 Rep_1022_c_1_207 230135 233194 - GH31_18
TF Rep_1022_c_1 Rep_1022_c_1_208 233353 234072 + GntR
STP Rep_1022_c_1 Rep_1022_c_1_209 234093 235259 + SIS | SIS
CAZyme Rep_1022_c_1 Rep_1022_c_1_210 235321 236478 + CE9
TC Rep_1022_c_1 Rep_1022_c_1_211 236618 237106 + 4.A.6.1.18
TC Rep_1022_c_1 Rep_1022_c_1_212 237118 238035 + 4.A.6.1.18
TC Rep_1022_c_1 Rep_1022_c_1_213 238022 238840 + 4.A.6.1.18
TC Rep_1022_c_1 Rep_1022_c_1_214 238864 239262 + 4.A.6.1.18
Gene ID: Rep_1022_c_1_203
Type: TC
Location: 225650 - 227221 (-)
Gene ID: Rep_1022_c_1_204
Type: TC
Location: 227330 - 228436 (+)
Gene ID: Rep_1022_c_1_205
Type: TC
Location: 228433 - 229194 (+)
Gene ID: Rep_1022_c_1_206
Type: peptidase
Location: 229216 - 230034 (+)
Gene ID: Rep_1022_c_1_207
Type: CAZyme
Location: 230135 - 233194 (-)
Gene ID: Rep_1022_c_1_208
Type: TF
Location: 233353 - 234072 (+)
Gene ID: Rep_1022_c_1_209
Type: STP
Location: 234093 - 235259 (+)
Gene ID: Rep_1022_c_1_210
Type: CAZyme
Location: 235321 - 236478 (+)
Gene ID: Rep_1022_c_1_211
Type: TC
Location: 236618 - 237106 (+)
Gene ID: Rep_1022_c_1_212
Type: TC
Location: 237118 - 238035 (+)
Gene ID: Rep_1022_c_1_213
Type: TC
Location: 238022 - 238840 (+)
Gene ID: Rep_1022_c_1_214
Type: TC
Location: 238864 - 239262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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