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Cluster: Rep_1022_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1022_c_1 Rep_1022_c_1_149 174308 175663 - 2.A.1.23.2
TC Rep_1022_c_1 Rep_1022_c_1_150 175688 177034 - 2.A.1.23.1
pfam Rep_1022_c_1 Rep_1022_c_1_151 177222 178082 - Acyltransferase
CAZyme Rep_1022_c_1 Rep_1022_c_1_152 178079 179029 - GT8
CAZyme Rep_1022_c_1 Rep_1022_c_1_153 179042 179992 - GT8
CAZyme Rep_1022_c_1 Rep_1022_c_1_154 180024 180848 - GT8
NULL(UNKNOWN) Rep_1022_c_1 Rep_1022_c_1_155 180851 181630 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_1022_c_1 Rep_1022_c_1_156 182092 182799 + Trans_reg_C
TC Rep_1022_c_1 Rep_1022_c_1_157 182846 184696 + 2.A.21.9.1
Gene ID: Rep_1022_c_1_149
Type: TC
Location: 174308 - 175663 (-)
Gene ID: Rep_1022_c_1_150
Type: TC
Location: 175688 - 177034 (-)
Gene ID: Rep_1022_c_1_151
Type: pfam
Location: 177222 - 178082 (-)
Gene ID: Rep_1022_c_1_152
Type: CAZyme
Location: 178079 - 179029 (-)
Gene ID: Rep_1022_c_1_153
Type: CAZyme
Location: 179042 - 179992 (-)
Gene ID: Rep_1022_c_1_154
Type: CAZyme
Location: 180024 - 180848 (-)
Gene ID: Rep_1022_c_1_155
Type:
Location: 180851 - 181630 (-)
Gene ID: Rep_1022_c_1_156
Type: TF
Location: 182092 - 182799 (+)
Gene ID: Rep_1022_c_1_157
Type: TC
Location: 182846 - 184696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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