Genome Details
Selected Rep_genome_ID: MGYG000004105
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG015_bin.43 | 2,341,452 | 98.46% | 1.6% | NA | Africa | H3AfricaPhase2 |
| CGMR039098 | 2,461,314 | 98.08% | 0.48% | China | Asia | CGMR |
| MGYG000004105 | 2,464,466 | 99.04% | 0.48% | UK | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000004105_CGC20 | CGCFAM_01423 | Yes | 5 | 2 | |
| MGYG000004105_CGC8 | CGCFAM_01971 | Yes | 7 | 2 | |
| MGYG000004105_CGC27 | CGCFAM_03321 | Yes | 4 | 1 | |
| MGYG000004105_CGC28 | CGCFAM_05761 | Yes | 7 | 2 | |
| MGYG000004105_CGC10 | CGCFAM_05762 | Yes | 6 | 3 | |
| MGYG000004105_CGC7 | CGCFAM_05763 | Yes | 3 | 1 | |
| MGYG000004105_CGC18 | CGCFAM_08972 | Yes | 12 | 5 | |
| MGYG000004105_CGC26 | CGCFAM_09618 | Yes | 3 | 1 |
Top CAZyme Families