Cluster: MGYG000004105_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004105
- CGC Family ID: CGCFAM_05762
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004105_2 | MGYG000004105_2_86 | 106240 | 108012 | - | GH78 |
| CAZyme | MGYG000004105_2 | MGYG000004105_2_87 | 108075 | 110330 | - | GH78 |
| pfam | MGYG000004105_2 | MGYG000004105_2_88 | 110494 | 111306 | + | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | MGYG000004105_2 | MGYG000004105_2_89 | 111344 | 112522 | + | AP_endonuc_2 | UxuA |
| CAZyme | MGYG000004105_2 | MGYG000004105_2_90 | 112555 | 113304 | + | CE4 |
| TC | MGYG000004105_2 | MGYG000004105_2_91 | 113324 | 114796 | - | 2.A.66.1.28 |
Gene ID: MGYG000004105_2_86
Type: CAZyme
Location: 106240 - 108012 (-)
Type: CAZyme
Location: 106240 - 108012 (-)
Gene ID: MGYG000004105_2_87
Type: CAZyme
Location: 108075 - 110330 (-)
Type: CAZyme
Location: 108075 - 110330 (-)
Gene ID: MGYG000004105_2_88
Type: pfam
Location: 110494 - 111306 (+)
Type: pfam
Location: 110494 - 111306 (+)
Gene ID: MGYG000004105_2_89
Type: pfam
Location: 111344 - 112522 (+)
Type: pfam
Location: 111344 - 112522 (+)
Gene ID: MGYG000004105_2_90
Type: CAZyme
Location: 112555 - 113304 (+)
Type: CAZyme
Location: 112555 - 113304 (+)
Gene ID: MGYG000004105_2_91
Type: TC
Location: 113324 - 114796 (-)
Type: TC
Location: 113324 - 114796 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.