Cluster: MGYG000004105_CGC18
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000004105
- CGC Family ID: CGCFAM_08972
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004105_4 | MGYG000004105_4_146 | 166527 | 167759 | - | GH5_57 |
| CAZyme | MGYG000004105_4 | MGYG000004105_4_147 | 168021 | 170051 | - | GH13_8 |
| TC | MGYG000004105_4 | MGYG000004105_4_148 | 170173 | 171696 | + | 2.A.17.1.7 |
| pfam | MGYG000004105_4 | MGYG000004105_4_149 | 171751 | 172533 | + | Lactamase_B | Lactamase_B_2 |
| STP | MGYG000004105_4 | MGYG000004105_4_150 | 172533 | 174647 | + | B12-binding |
| CAZyme | MGYG000004105_4 | MGYG000004105_4_151 | 174684 | 176792 | + | GH141 |
| sulfatase | MGYG000004105_4 | MGYG000004105_4_152 | 176916 | 177728 | + | S1_2 |
| pfam | MGYG000004105_4 | MGYG000004105_4_153 | 178129 | 180978 | - | UvrA_DNA-bind | UvrA_inter |
| CAZyme | MGYG000004105_4 | MGYG000004105_4_154 | 181008 | 181925 | - | GH23 |
| pfam | MGYG000004105_4 | MGYG000004105_4_155 | 182074 | 182970 | + | S1_2 | S1_2 | CvfB_WH |
| pfam | MGYG000004105_4 | MGYG000004105_4_156 | 183032 | 184330 | - | Lipocalin | Epimerase | Lipocalin_2 | DUF1731 |
| CAZyme | MGYG000004105_4 | MGYG000004105_4_157 | 184486 | 187443 | + | GH106 |
Gene ID: MGYG000004105_4_146
Type: CAZyme
Location: 166527 - 167759 (-)
Type: CAZyme
Location: 166527 - 167759 (-)
Gene ID: MGYG000004105_4_147
Type: CAZyme
Location: 168021 - 170051 (-)
Type: CAZyme
Location: 168021 - 170051 (-)
Gene ID: MGYG000004105_4_148
Type: TC
Location: 170173 - 171696 (+)
Type: TC
Location: 170173 - 171696 (+)
Gene ID: MGYG000004105_4_149
Type: pfam
Location: 171751 - 172533 (+)
Type: pfam
Location: 171751 - 172533 (+)
Gene ID: MGYG000004105_4_150
Type: STP
Location: 172533 - 174647 (+)
Type: STP
Location: 172533 - 174647 (+)
Gene ID: MGYG000004105_4_151
Type: CAZyme
Location: 174684 - 176792 (+)
Type: CAZyme
Location: 174684 - 176792 (+)
Gene ID: MGYG000004105_4_152
Type: sulfatase
Location: 176916 - 177728 (+)
Type: sulfatase
Location: 176916 - 177728 (+)
Gene ID: MGYG000004105_4_153
Type: pfam
Location: 178129 - 180978 (-)
Type: pfam
Location: 178129 - 180978 (-)
Gene ID: MGYG000004105_4_154
Type: CAZyme
Location: 181008 - 181925 (-)
Type: CAZyme
Location: 181008 - 181925 (-)
Gene ID: MGYG000004105_4_155
Type: pfam
Location: 182074 - 182970 (+)
Type: pfam
Location: 182074 - 182970 (+)
Gene ID: MGYG000004105_4_156
Type: pfam
Location: 183032 - 184330 (-)
Type: pfam
Location: 183032 - 184330 (-)
Gene ID: MGYG000004105_4_157
Type: CAZyme
Location: 184486 - 187443 (+)
Type: CAZyme
Location: 184486 - 187443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.