Cluster: MGYG000004105_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004105
- CGC Family ID: CGCFAM_05761
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004105_8 | MGYG000004105_8_21 | 21405 | 22073 | + | 9.B.104.1.2 |
| pfam | MGYG000004105_8 | MGYG000004105_8_22 | 22102 | 23232 | + | Exo_endo_phos |
| TC | MGYG000004105_8 | MGYG000004105_8_23 | 23504 | 25003 | - | 2.A.3.7.3 |
| pfam | MGYG000004105_8 | MGYG000004105_8_24 | 25123 | 26562 | - | Pyridoxal_deC |
| CAZyme | MGYG000004105_8 | MGYG000004105_8_25 | 26844 | 28880 | - | GH106 |
| pfam | MGYG000004105_8 | MGYG000004105_8_26 | 29088 | 29921 | - | Glyco_hydro_106 |
| CAZyme | MGYG000004105_8 | MGYG000004105_8_27 | 30101 | 32566 | + | GH78 |
Gene ID: MGYG000004105_8_21
Type: TC
Location: 21405 - 22073 (+)
Type: TC
Location: 21405 - 22073 (+)
Gene ID: MGYG000004105_8_22
Type: pfam
Location: 22102 - 23232 (+)
Type: pfam
Location: 22102 - 23232 (+)
Gene ID: MGYG000004105_8_23
Type: TC
Location: 23504 - 25003 (-)
Type: TC
Location: 23504 - 25003 (-)
Gene ID: MGYG000004105_8_24
Type: pfam
Location: 25123 - 26562 (-)
Type: pfam
Location: 25123 - 26562 (-)
Gene ID: MGYG000004105_8_25
Type: CAZyme
Location: 26844 - 28880 (-)
Type: CAZyme
Location: 26844 - 28880 (-)
Gene ID: MGYG000004105_8_26
Type: pfam
Location: 29088 - 29921 (-)
Type: pfam
Location: 29088 - 29921 (-)
Gene ID: MGYG000004105_8_27
Type: CAZyme
Location: 30101 - 32566 (+)
Type: CAZyme
Location: 30101 - 32566 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.