Cluster: MGYG000004105_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004105
- CGC Family ID: CGCFAM_01423
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004105_5 | MGYG000004105_5_147 | 175263 | 176423 | - | 2.A.1.7.16 |
| STP | MGYG000004105_5 | MGYG000004105_5_148 | 176501 | 177091 | - | SIS |
| pfam | MGYG000004105_5 | MGYG000004105_5_149 | 177097 | 178071 | - | ROK |
| CAZyme | MGYG000004105_5 | MGYG000004105_5_150 | 178079 | 180493 | - | GH2 |
| CAZyme | MGYG000004105_5 | MGYG000004105_5_151 | 180543 | 183200 | - | CBM67 | GH78 |
Gene ID: MGYG000004105_5_147
Type: TC
Location: 175263 - 176423 (-)
Type: TC
Location: 175263 - 176423 (-)
Gene ID: MGYG000004105_5_148
Type: STP
Location: 176501 - 177091 (-)
Type: STP
Location: 176501 - 177091 (-)
Gene ID: MGYG000004105_5_149
Type: pfam
Location: 177097 - 178071 (-)
Type: pfam
Location: 177097 - 178071 (-)
Gene ID: MGYG000004105_5_150
Type: CAZyme
Location: 178079 - 180493 (-)
Type: CAZyme
Location: 178079 - 180493 (-)
Gene ID: MGYG000004105_5_151
Type: CAZyme
Location: 180543 - 183200 (-)
Type: CAZyme
Location: 180543 - 183200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.