Cluster: MGYG000004105_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004105
- CGC Family ID: CGCFAM_01971
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004105_2 | MGYG000004105_2_43 | 48916 | 50076 | + | 9.B.97.1.2 |
| STP | MGYG000004105_2 | MGYG000004105_2_44 | 50144 | 50554 | + | Glyoxalase |
| TC | MGYG000004105_2 | MGYG000004105_2_45 | 50574 | 52136 | + | 3.B.1.1.2 |
| NULL(UNKNOWN) | MGYG000004105_2 | MGYG000004105_2_46 | 52139 | 52366 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000004105_2 | MGYG000004105_2_47 | 52409 | 52843 | + | Biotin_lipoyl | Biotin_lipoyl_2 |
| CAZyme | MGYG000004105_2 | MGYG000004105_2_48 | 52914 | 53855 | + | GH32 |
| CAZyme | MGYG000004105_2 | MGYG000004105_2_49 | 53914 | 55515 | + | GH20 |
Gene ID: MGYG000004105_2_43
Type: TC
Location: 48916 - 50076 (+)
Type: TC
Location: 48916 - 50076 (+)
Gene ID: MGYG000004105_2_44
Type: STP
Location: 50144 - 50554 (+)
Type: STP
Location: 50144 - 50554 (+)
Gene ID: MGYG000004105_2_45
Type: TC
Location: 50574 - 52136 (+)
Type: TC
Location: 50574 - 52136 (+)
Gene ID: MGYG000004105_2_46
Type:
Location: 52139 - 52366 (+)
Type:
Location: 52139 - 52366 (+)
Gene ID: MGYG000004105_2_47
Type: pfam
Location: 52409 - 52843 (+)
Type: pfam
Location: 52409 - 52843 (+)
Gene ID: MGYG000004105_2_48
Type: CAZyme
Location: 52914 - 53855 (+)
Type: CAZyme
Location: 52914 - 53855 (+)
Gene ID: MGYG000004105_2_49
Type: CAZyme
Location: 53914 - 55515 (+)
Type: CAZyme
Location: 53914 - 55515 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.