Genome Details
Selected Rep_genome_ID: MGYG000002580
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B97.bin_14 | 3,194,368 | 98.95% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| CGMR025063 | 2,802,463 | 98.66% | 0% | China | Asia | CGMR |
| ChuDM_2017_SRR8942397_bin.19 | 2,923,524 | 98.65% | 0% | US | North America | ELGG |
| MGYG000002580 | 3,016,685 | 99.33% | 0% | China | Asia | UHGG |
| Rep_2371 | 3,122,020 | 98.3222% | 1.67785% | NA | NA | WIS |
| SPMP45_bin.205 | 3,020,870 | 96.82% | 1.14% | Singapore | Asia | SPMP |
| SW046_bin.12 | 2,792,039 | 98.32% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000002580_CGC7 | CGCFAM_00003 | Yes | 14 | 6 | |
| MGYG000002580_CGC18 | CGCFAM_00051 | Yes | 3 | 1 | |
| MGYG000002580_CGC26 | CGCFAM_02110 | Yes | 9 | 1 | |
| MGYG000002580_CGC29 | CGCFAM_02258 | Yes | 5 | 1 | |
| MGYG000002580_CGC33 | CGCFAM_02331 | Yes | 4 | 1 | |
| MGYG000002580_CGC19 | CGCFAM_03970 | Yes | 4 | 1 | |
| MGYG000002580_CGC10 | CGCFAM_04933 | Yes | 4 | 1 | |
| MGYG000002580_CGC16 | CGCFAM_05018 | Yes | 4 | 1 | |
| MGYG000002580_CGC15 | CGCFAM_05929 | Yes | 7 | 1 | |
| MGYG000002580_CGC34 | CGCFAM_05930 | Yes | 5 | 2 | |
| MGYG000002580_CGC31 | CGCFAM_09475 | Yes | 11 | 1 | |
| MGYG000002580_CGC8 | CGCFAM_09979 | Yes | 4 | 1 |
Top CAZyme Families