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Cluster: MGYG000002580_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000002580_16 MGYG000002580_16_40 39013 40395 - 2.A.66.1.28
CAZyme MGYG000002580_16 MGYG000002580_16_41 40588 41970 - GH28
TC MGYG000002580_16 MGYG000002580_16_42 42276 43631 + 2.A.66.1.32
peptidase MGYG000002580_16 MGYG000002580_16_43 43843 45105 + M38.UNW
pfam MGYG000002580_16 MGYG000002580_16_44 45309 46604 + PucR | HTH_30 | GGDEF_2
TC MGYG000002580_16 MGYG000002580_16_45 46980 48332 + 2.A.35.2.1
pfam MGYG000002580_16 MGYG000002580_16_46 48459 49085 + Cytidylate_kin2
STP MGYG000002580_16 MGYG000002580_16_47 49491 50411 + PfkB
TC MGYG000002580_16 MGYG000002580_16_48 50514 52439 + 4.A.2.1.4
STP MGYG000002580_16 MGYG000002580_16_49 52479 52736 + PTS-HPr
TC MGYG000002580_16 MGYG000002580_16_50 52790 54424 + 8.A.7.1.1
Gene ID: MGYG000002580_16_40
Type: TC
Location: 39013 - 40395 (-)
Gene ID: MGYG000002580_16_41
Type: CAZyme
Location: 40588 - 41970 (-)
Gene ID: MGYG000002580_16_42
Type: TC
Location: 42276 - 43631 (+)
Gene ID: MGYG000002580_16_43
Type: peptidase
Location: 43843 - 45105 (+)
Gene ID: MGYG000002580_16_44
Type: pfam
Location: 45309 - 46604 (+)
Gene ID: MGYG000002580_16_45
Type: TC
Location: 46980 - 48332 (+)
Gene ID: MGYG000002580_16_46
Type: pfam
Location: 48459 - 49085 (+)
Gene ID: MGYG000002580_16_47
Type: STP
Location: 49491 - 50411 (+)
Gene ID: MGYG000002580_16_48
Type: TC
Location: 50514 - 52439 (+)
Gene ID: MGYG000002580_16_49
Type: STP
Location: 52479 - 52736 (+)
Gene ID: MGYG000002580_16_50
Type: TC
Location: 52790 - 54424 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002580_16_49 vegetarian > vegan 1.06900 0.00536

🧭 Explore Read Mapping of CGC

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