Cluster: MGYG000002580_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002580
- CGC Family ID: CGCFAM_02331
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002580_17 | MGYG000002580_17_22 | 19536 | 20414 | + | 3.A.1.148.3 |
| NULL(UNKNOWN) | MGYG000002580_17 | MGYG000002580_17_23 | 20411 | 21634 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000002580_17 | MGYG000002580_17_24 | 21772 | 22515 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000002580_17 | MGYG000002580_17_25 | 22743 | 23777 | + | GH5_37 |
Gene ID: MGYG000002580_17_22
Type: TC
Location: 19536 - 20414 (+)
Type: TC
Location: 19536 - 20414 (+)
Gene ID: MGYG000002580_17_23
Type:
Location: 20411 - 21634 (+)
Type:
Location: 20411 - 21634 (+)
Gene ID: MGYG000002580_17_24
Type: TF
Location: 21772 - 22515 (-)
Type: TF
Location: 21772 - 22515 (-)
Gene ID: MGYG000002580_17_25
Type: CAZyme
Location: 22743 - 23777 (+)
Type: CAZyme
Location: 22743 - 23777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002580_17_25 | vegetarian > vegan | 1.11317 | 0.00536 |