Cluster: MGYG000002580_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002580
- CGC Family ID: CGCFAM_05930
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002580_17 | MGYG000002580_17_31 | 32132 | 33463 | + | 2.A.66.1.33 |
| TC | MGYG000002580_17 | MGYG000002580_17_32 | 33734 | 35149 | + | 2.A.25.1.9 |
| CAZyme | MGYG000002580_17 | MGYG000002580_17_33 | 35357 | 36997 | + | GH143 |
| TF | MGYG000002580_17 | MGYG000002580_17_34 | 37102 | 37785 | + | GntR |
| CAZyme | MGYG000002580_17 | MGYG000002580_17_35 | 37830 | 38570 | + | CE1 |
Gene ID: MGYG000002580_17_31
Type: TC
Location: 32132 - 33463 (+)
Type: TC
Location: 32132 - 33463 (+)
Gene ID: MGYG000002580_17_32
Type: TC
Location: 33734 - 35149 (+)
Type: TC
Location: 33734 - 35149 (+)
Gene ID: MGYG000002580_17_33
Type: CAZyme
Location: 35357 - 36997 (+)
Type: CAZyme
Location: 35357 - 36997 (+)
Gene ID: MGYG000002580_17_34
Type: TF
Location: 37102 - 37785 (+)
Type: TF
Location: 37102 - 37785 (+)
Gene ID: MGYG000002580_17_35
Type: CAZyme
Location: 37830 - 38570 (+)
Type: CAZyme
Location: 37830 - 38570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.